In our next MünsteR R-user group meetup on Tuesday, April 17th, 2018 Kai Lichtenberg will talk about deep learning with Keras. You can RSVP here: http://meetu.ps/e/DDY1B/w54bW/f Although neural networks have been around for quite a while now, deep learning really just took of a few years ago. It pretty much all started when Alex Krizhevsky and Geoffrey Hinton utterly crushed classic image recognition in the 2012 ImageNet Large Scale Visual Recognition Challenge by implementing a deep neural network with CUDA on graphics cards.

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I’ll be talking about Deep Learning with Keras in R and Python at the following upcoming meetup: Ruhr.Py 2018 on Wednesday, April 4th Introducing Deep Learning with Keras and Python Keras is a high-level API written in Python for building and prototyping neural networks. It can be used on top of TensorFlow, Theano or CNTK. In this talk we build, train and visualize a Model using Python and Keras - all interactive with Jupyter Notebooks!

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A while back, I did an analysis of the family network of major characters from the A Song of Ice and Fire books and the Game of Thrones TV show. In that analysis I found out that House Stark (specifically Ned and Sansa) and House Lannister (especially Tyrion) are the most important family connections in Game of Thrones; they also connect many of the story lines and are central parts of the narrative.

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Registration is now open for my 1.5-day workshop on deep learning with Keras and TensorFlow using R. It will take place on April 12th and 13th in Hamburg, Germany. You can read about one participant’s experience in my last workshop: Big Data – a buzz word you can find everywhere these days, from nerdy blogs to scientific research papers and even in the news. But how does Big Data Analysis work, exactly?

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In our next MünsteR R-user group meetup on March 5th, 2018 Frank Rühle will talk about bioinformatics and how to analyse genome data. You can RSVP here: http://meetu.ps/e/DDY1B/w54bW/f Next-Generation sequencing and array-based technologies provided a plethora of gene expression data in the public genomics databases. But how to get meaningful information and functional implications out of this vast amount of data? Various R-packages have been published by the Bioconductor user community for distinct kinds of analysis strategies.

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The plumber package for R makes it easy to expose existing R code as a webservice via an API (https://www.rplumber.io/, Trestle Technology, LLC 2017). You take an existing R script and make it accessible with plumber by simply adding a few lines of comments. If you have worked with Roxygen before, e.g. when building a package, you will already be familiar with the core concepts. If not, here are the most important things to know:

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Recently, I announced my workshop on Deep Learning with Keras and TensorFlow. The next dates for it are January 18th and 19th in Solingen, Germany. You can register now by following this link: https://www.codecentric.de/schulung/deep-learning-mit-keras-und-tensorflow If any non-German-speaking people want to attend, I’m happy to give the course in English! Contact me if you have further questions. As a little bonus, I am also sharing my sketch notes from a Podcast I listened to when first getting into Keras:

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Dr. Shirin Elsinghorst

Biologist turned Bioinformatician turned Data Scientist

Data Scientist

Münster, Germany